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Advanced Quantitative Analysis in Entomological Science

Analytical Thinking

Course Description

The field of entomology addresses diverse and unique types of data that requires analytical skills for both academic and non-academic job markets. This course will cover R programing language skills to manage, analyze, and visualize data. These skills can be used to address the analytical needs for professional entomologists.


Athena Title

Analysis in Entomological Sci


Prerequisite

Math proficiency is required, and prior statistics course experience is highly recommended.


Semester Course Offered

Offered fall


Grading System

A - F (Traditional)


Student learning Outcomes

  • Students will be able to recognize different functions, syntax, and file types used in R.
  • Students will be able to interpret textbook and online example code to be repurposed for their own data.
  • Students will be able to complete various simple statistical analyses using various types of data.
  • Students will be able to determine the appropriate analysis based on the type of data and experimental design.
  • Students will be able to design and manipulate data visualizations of publication quality.
  • Students will be able to effectively defend and explain data analyses and interpretation of results.
  • Students will be able to understand the importance and practice of reproducible science.

Topical Outline

  • Lecture: Review Syllabus, Types of Data Lab: Basics of R
  • Lecture: Data Management, Transformations, and Visualization Lab: Tidyverse and ggplot2 Package
  • Lecture: t-test, Chi-square, and Ordinary Least Squares Lab: Simple Linear Regression Excel exercise, lm function
  • Lecture: ANOVA and ANCOVA, Package Report Due Lab: ANOVA Type I, II, or III, Multiple Comparisons, Anova vs. aov function
  • Lecture: Metadata and Reproduceable Science Exam I Lab: Messy Data, RMarkdown and Quatro
  • Lecture: Experimental Design (CRD, RCBD, Split Plot, Latin Square, etc.) Lab: Block and Random Effect Notation
  • Lecture: Complex Data Visualizations, and MLE Lab: ggplot2 Package Specifications
  • Lecture: Logistic Regression Lab: family syntax
  • Lecture: Count Models and Overdispersion, Script De-Bug Due Lab: family syntax cont.
  • Lecture: Mixed Effects Models Exam II Lab: glmmTMB vs. lme4 Package
  • Data Workshop
  • Student Presentations
  • Final Exam

Institutional Competencies Learning Outcomes

Analytical Thinking

The ability to reason, interpret, analyze, and solve problems from a wide array of authentic contexts.



Syllabus


Public CV